CDS

Accession Number TCMCG007C03151
gbkey CDS
Protein Id XP_009121739.1
Location join(17002522..17002683,17002908..17003229,17003349..17006406,17006491..17006589,17006675..17006990)
Gene LOC103846550
GeneID 103846550
Organism Brassica rapa

Protein

Length 1318aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_009123491.2
Definition elongator complex protein 1 isoform X1 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category K
Description Acts as subunit of the RNA polymerase II elongator complex, which is a histone acetyltransferase component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03016        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
KEGG_ko ko:K11373        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0001101        [VIEW IN EMBL-EBI]
GO:0001510        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006399        [VIEW IN EMBL-EBI]
GO:0006400        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006979        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008033        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008283        [VIEW IN EMBL-EBI]
GO:0008284        [VIEW IN EMBL-EBI]
GO:0009451        [VIEW IN EMBL-EBI]
GO:0009653        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009737        [VIEW IN EMBL-EBI]
GO:0009787        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009965        [VIEW IN EMBL-EBI]
GO:0009966        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010016        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010154        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010646        [VIEW IN EMBL-EBI]
GO:0010928        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0023051        [VIEW IN EMBL-EBI]
GO:0030488        [VIEW IN EMBL-EBI]
GO:0031537        [VIEW IN EMBL-EBI]
GO:0031538        [VIEW IN EMBL-EBI]
GO:0032259        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032870        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033588        [VIEW IN EMBL-EBI]
GO:0033993        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0035265        [VIEW IN EMBL-EBI]
GO:0040007        [VIEW IN EMBL-EBI]
GO:0042127        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043414        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048366        [VIEW IN EMBL-EBI]
GO:0048367        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048530        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048589        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048827        [VIEW IN EMBL-EBI]
GO:0048831        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050793        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051239        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070887        [VIEW IN EMBL-EBI]
GO:0071215        [VIEW IN EMBL-EBI]
GO:0071229        [VIEW IN EMBL-EBI]
GO:0071310        [VIEW IN EMBL-EBI]
GO:0071396        [VIEW IN EMBL-EBI]
GO:0071495        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0080178        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090698        [VIEW IN EMBL-EBI]
GO:0097305        [VIEW IN EMBL-EBI]
GO:0097306        [VIEW IN EMBL-EBI]
GO:0099402        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901419        [VIEW IN EMBL-EBI]
GO:1901700        [VIEW IN EMBL-EBI]
GO:1901701        [VIEW IN EMBL-EBI]
GO:1905392        [VIEW IN EMBL-EBI]
GO:1905957        [VIEW IN EMBL-EBI]
GO:2000024        [VIEW IN EMBL-EBI]
GO:2000026        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAAAAACTTGAAGCTTTTCTCGGAGGTTTCTCAGAACATCCAATTGCATTCGACTGAAGACGAAGCTGTACAGTTCGCAGCTTACGACATCGACCAGAGTCGCTTGTTCTTCGCATCTTCTACTAACTTCGTTTACGCCCTTCACCTCTCTTCCTTCCACAATGGGAGAGATAGTGCGAAGGGTTTGCCTGTGGAGGTCTGCAGTATTGATTTGGAGGCAGAGGATTTCATCACTGCCTTTGATTATCTCGCGGAGAAGGAGTCTTTATTAATTGGGACGTCTCGTGGGCTTCTGCTTGTGCACGAGGTGGAGAGCAATGTGACTGAGCTAGTTGGAAATATAGAAGGAGGTGTCACGTGTCTCTCGCCTAGTCCTACTGGAGATCTACTTGGATTGATTAGCGGTTTTGGTCAGTTACTTGTAATGACTTATGATTGGGATTTGATGTACGAGAGGGCGGTTTCTGAAGGTGGTTACGTACGTGAAGCAGATGATGTGTCTGTAAGCTGTGAGGGACCTTCCATTTCCTGGAGAGGCGATGGGAAGTATTTTGCCACTATGGGTGAGGTTTTTGAATCCGGCTCTATGCACAAGAAGATTAAGATATGGGAGAGTGATTCTGGCGCTTTGCAGTCTTCTTCAGAAACAAAAGATTTCATGAAGGGGATTCTTGAATGGATGCCTAGTGGGGCAAAGATTGCAGCTGTTTATAAAAAGAAGTCAGATGATGGATGCCCGTCGATTGCTTTCTTCGAGAGGAACGGACTTGAGAGGAGCTCATTTAGCATCGGAGAGCCTGGAGATGCCAACGTAGCATTTGAATCTCTGAAGTGGAACTCTGCATCAGATCTTCTTGCAGGGGTTGTTAGTTGCAAAACGCATGATGCTGTTAGGGTGTGGTTCTTTAGCAACAACCATTGGTACCTAAAACAGGAGATTAGGTATCCAAGGGAAGCTGGAGTAATGGTCATGTGGGATCCAACTAAGCCAACGCAGTTAATATGTTGGACTCTGGCAGGGAAAGTTACTGTTTGTAATTTTATGTGGGTAACGGCAGTCATGGAGGACTCAACAGCCTTTGTCGTAGATAATAACAAGATTCTCGTGACACCACTGTCTTTGTCCTTGATGCCGCCTCCTATGTATTTGTTCAGCCTTAGCTTCTCTTCCGCTGTCAGGGACATAGCATATTACTCAAGGAACTCTAAAAATTGTCTGGCTGTGTTCTTGTCTGATGGAAACCTGTCTTTTGTTGAGTTTCCTGCACGTGATACTTGGGAAGATCTTGAAGGTAGAGACTTCAATGCAGAAGTTTCGGAGTGTAAAACAGCTCTGGGCTCTGTTACACATCTTCTATGGCTCGATGTCCATTCGCTTCTGTGCGTCTCTGCTTACGGTTCCAGCCAGAACAAGTGTCTCTCTTCTGGTTCGTCTGAGACAGAGCTCCACGGTTCTTATTTACAGGAACTTGAAGTTGTCTGTCACGAGGATCATGTTCCTGATCAAGTAACATGCTCTGGCTTTGGCGCTAGCGTTACTTCCCAGACACCTCTCGAGTCACCTGTCATGGCTCTTGCCTGGAACCCTAGCAAGCGTGATTCAGCCTTTGTAGAGTTTGAGGGTGGGAAAGTGCTTAGCTATGCATCAAGATCAGGCTTTATGGAAACTCGTATCGGCAATGACAGTGTCTCTTTTCCATCAGCTTGTCCTTTGGTGAGGGTGGCGCAGATTGATGCTGGTGGCGTGCAGAAGCCCTTGGTATGTGGGCTAGATGATATGGGCAGACTGTACATCAACGGGAAGAGCCTATGTAATAACTGCAGCAGCTTCTCATTTTACTCAGAGTTGGACAATGAAGTGGTTACCCATCTGATCATCTTGACCAAACAGGATTTTCTCTTTATCATCGATACCGAGGATGTACTGCAGGGAGGAGAAGTGGCACTTGGAAACGTCTACTTTGTCATTGACGGTAGAAAGCGAGATGAGGAAGTTATGAGCTACGTAAACGTTTGGGAGAAAGGTGCCAAAGTAATAGGAGTCCTCAACGGAGACGAAGCTGCTGTAATATTACAAACTATCCGGGGGAATCTCGAATGCATTTATCCTAGAAAGCTGGTCTTGTCTTCCATTACTAACGCGTTAGCTCAGCAACGGTTCAAAGATGCACTAAACTTGGTAAGGCGACACAGAATCGACTTTAATGTAATCGTGGACCTATACGGGTGGCAGGCGTTTCTACAATCAGCTGTAGAGTTTGTTGCACAAGTAAACAATTTGAACCACGTTACAGAGTTTGTTTGCGCCATGAAGAACGAAGATGTTACAGAAACACTTTACAAGACGTTCTCCTTCTCCAAAAAGAGGGACAAGGCTTTGCAAGCGAAGGATCTATCCGGTAACAAAGTGTCATCAGTTCTACAAGCGATTAGGAAAACCCTTGAAGAACATATACCAGAGAGTCCCTCAAGGGAACTATGTATCTTGACCACTCTTGCTCGAAGTGATCCACCGGCTATTGAGGAATCTCTCATGAGGATAAAATCTGTTCGTGAGATGGAGTTGCAAAACTCCTCTTCTGATGATAACTCAAGTAAAAAGTCTCGTCCATCTGCAGAAGAAGCATTGAAACACCTTCTGTGGTTATTAGACTCAGAGGCTGTCTTCGAAGCTGCTTTAGGTCTTTACGATCTGAACCTTGCAGCTATCGTGGCGCTCAACTCCCAACGCGATCCGAAAGAGTTTCTACCTTATCTCCAGGAGCTGGAGAGAATGTCCGAACCTCTGATGCATTTCAACATCGACCTTAAACTGCAGCGTTTCGATAGCGCTCTCAAGAGCATCGTATCAGCAGGGGATGAGTACTTTCCTCATTGCATGGACTTGATCAAGAAAAACCCTCAGCTCTTCCCGCTGGGACTTCAGCTGATCACCGATCTTGAAAAGAAACAAGCGGTGCTAGAGGCTTGGGGAGACCATCTCACTGATGAGAAACGTTTTGAGGATGCTGCTACTACGTACCTTTGTTGTTTTAACCTTGAAAAGGCTTCGAAGGCGTATCGTGAAAGTGGTGATTGGAGTGGGGTACTCAGAGTAGGCGCGCTGATGAAGTTAGGGAAAGATGAGATCTTGAAACTGGCGTACGAGTTATGTGAAGAGGTCAATGCTCTTGGGAAGCCTGGGGAAGCAGCGAAGATAGCTTTAGAGTATTGCGGTGATATAAGCGGTGGAGTTAATTTCCTTATCAATGCGAGGGAGTGGGAAGAAGCTTTAAGAGTTGCCTTTATGCATACAGAAGATGGTTTAGTCTCGGTGGTGAAGAGCTCTGCTCTTGAGTGTGCTAATGGTCTAGTAAGCGAATTCAAAGAATCGATAGAGAAAGTAGGAAAGTATTTGACTCGGTATCTAGCTGTTCGTCAGAGACGGTTGCTGCTTGCAGCAAAGCTCAAGTCTGAGGAACGGTCAGTCATTGATCTTGATGATGACACAGCTTCAGAAGCAAGTAGCAACCTGAGTGGCATGAGCGCCTATACTTTAGGGACAAGGAGAGGTTCTGCTGCTTCAGTCACCTCAAGCACGGCGACTAAGGCAAGAGACTTGAGGCGGCAGAGAAAGAGCGGGAAGATCCGAGCTGGCAGTGCGGGTGAGGAGATGGCTCTTGTTGATCATTTGAAAGGTATGCGTATGACAGAAGGAGGAAAGAGAGAGCTCAAGTCTTTATTGATATGTTTGGTAACACTTGGTGAGAAAGAGTCTGCACAGAAGTTGCAACAGACTGCAGAGAATTTCCAGGTCGCTCAGGTAGCAGCAGTGGAGCTAGCAGACGATACAGTGTCCAGCGAGAGCGTCGATGAAGAATTGTATTCCTTTGAACGTTACGCTCTGAAGACGAGGTCCACGGCACGAGGCTCTGATGCGTTTAGCTGGATGCTTAAGGTTTTCTTTAGCCCGTGA
Protein:  
MKNLKLFSEVSQNIQLHSTEDEAVQFAAYDIDQSRLFFASSTNFVYALHLSSFHNGRDSAKGLPVEVCSIDLEAEDFITAFDYLAEKESLLIGTSRGLLLVHEVESNVTELVGNIEGGVTCLSPSPTGDLLGLISGFGQLLVMTYDWDLMYERAVSEGGYVREADDVSVSCEGPSISWRGDGKYFATMGEVFESGSMHKKIKIWESDSGALQSSSETKDFMKGILEWMPSGAKIAAVYKKKSDDGCPSIAFFERNGLERSSFSIGEPGDANVAFESLKWNSASDLLAGVVSCKTHDAVRVWFFSNNHWYLKQEIRYPREAGVMVMWDPTKPTQLICWTLAGKVTVCNFMWVTAVMEDSTAFVVDNNKILVTPLSLSLMPPPMYLFSLSFSSAVRDIAYYSRNSKNCLAVFLSDGNLSFVEFPARDTWEDLEGRDFNAEVSECKTALGSVTHLLWLDVHSLLCVSAYGSSQNKCLSSGSSETELHGSYLQELEVVCHEDHVPDQVTCSGFGASVTSQTPLESPVMALAWNPSKRDSAFVEFEGGKVLSYASRSGFMETRIGNDSVSFPSACPLVRVAQIDAGGVQKPLVCGLDDMGRLYINGKSLCNNCSSFSFYSELDNEVVTHLIILTKQDFLFIIDTEDVLQGGEVALGNVYFVIDGRKRDEEVMSYVNVWEKGAKVIGVLNGDEAAVILQTIRGNLECIYPRKLVLSSITNALAQQRFKDALNLVRRHRIDFNVIVDLYGWQAFLQSAVEFVAQVNNLNHVTEFVCAMKNEDVTETLYKTFSFSKKRDKALQAKDLSGNKVSSVLQAIRKTLEEHIPESPSRELCILTTLARSDPPAIEESLMRIKSVREMELQNSSSDDNSSKKSRPSAEEALKHLLWLLDSEAVFEAALGLYDLNLAAIVALNSQRDPKEFLPYLQELERMSEPLMHFNIDLKLQRFDSALKSIVSAGDEYFPHCMDLIKKNPQLFPLGLQLITDLEKKQAVLEAWGDHLTDEKRFEDAATTYLCCFNLEKASKAYRESGDWSGVLRVGALMKLGKDEILKLAYELCEEVNALGKPGEAAKIALEYCGDISGGVNFLINAREWEEALRVAFMHTEDGLVSVVKSSALECANGLVSEFKESIEKVGKYLTRYLAVRQRRLLLAAKLKSEERSVIDLDDDTASEASSNLSGMSAYTLGTRRGSAASVTSSTATKARDLRRQRKSGKIRAGSAGEEMALVDHLKGMRMTEGGKRELKSLLICLVTLGEKESAQKLQQTAENFQVAQVAAVELADDTVSSESVDEELYSFERYALKTRSTARGSDAFSWMLKVFFSP